BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C08LP1|AL430515
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1939 0.0
3x_Contig1745 1630 0.0
3x_Contig883 786 0.0
3x_Contig54 197 5e-50
>3x_Contig1806
Length = 53694
Score = 1939 bits (977), Expect = 0.0
Identities = 979/981 (99%)
Strand = Plus / Plus
Query: 1 gatcattgccaagactccatttgctagagtcttatcctcaaaattacgcttttggttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46902 gatcattgccaagactccatttgctagagtcttatcctcaaaattacgcttttggttttc 46961
Query: 61 tgcagacaatgctgtccacacaacgtaacaagaagtcattgaaactaaggatatcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46962 tgcagacaatgctgtccacacaacgtaacaagaagtcattgaaactaaggatatcaagaa 47021
Query: 121 taattgtcttcttttgaagaatggggcgatgtaacctattaaaattagtgaacataacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47022 taattgtcttcttttgaagaatggggcgatgtaacctattaaaattagtgaacataacca 47081
Query: 181 gttgtaaagcattaaccaaccattccatttcaattgatcatcaggatcagttataccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47082 gttgtaaagcattaaccaaccattccatttcaattgatcatcaggatcagttataccaat 47141
Query: 241 ggagttgaagacttttgataaatagtaagacactaatccatttccggaaagttgtgtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47142 ggagttgaagacttttgataaatagtaagacactaatccatttccggaaagttgtgtgaa 47201
Query: 301 aattgcagtccagatcaaaatccacaatctatgacgattaccggaagttttaatgaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47202 aattgcagtccagatcaaaatccacaatctatgacgattaccggaagttttaatgaaatc 47261
Query: 361 agagaacttggtagattgggaagctttttcttgttcaatagccaatttaatttctgccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47262 agagaacttggtagattgggaagctttttcttgttcaatagccaatttaatttctgccag 47321
Query: 421 ctcaaaatcgatcaaacctgcgtattcctcattatttcctgcgtgatatttattcaagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47322 ctcaaaatcgatcaaacctgcgtattcctcattatttcctgcgtgatatttattcaagat 47381
Query: 481 tgctcttgcttcagcatctctattatggaacaccaaatatcttggagattctgggcattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47382 tgctcttgcttcagcatctctattatggaacaccaaatatcttggagattctgggcattt 47441
Query: 541 gtatagcgcgacgagctgaacgagtggaaacaaagcttgaatgatagatggaattctcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47442 gtatagcgcgacgagctgaacgagtggaaacaaagcttgaatgatagatggaattctcca 47501
Query: 601 gttccagtggtgagctagatttctgcagccataggtgacccaagctgaaacaatagcgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47502 gttccagtggtgagctagatttctgcagccataggtgacccaagctgaaacaatagcgcc 47561
Query: 661 aaggtaccaacacgtattatatatggaagtacaaagctctctgtgaggcggatatgatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47562 aaggtaccaacacgtattatatatggaagtacaaagctctctgtgaggcggatatgatat 47621
Query: 721 ttctgagatcaaagctggtgtggcaatactgatcaacaatactccagaacctaagataat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47622 ttctgagatcaaagctggtgtggcaatactgatcaacaatactccagaacctaagataat 47681
Query: 781 acgtgaagcaacaaacataccgaagacgtcttttctgtcatagtcctcaggtaaaccatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47682 acgtgaagcaacaaacataccgaagacgtcttttctgtcatagtcctcaggtaaaccatt 47741
Query: 841 gatccatgtaccagacaatgcttggatgaggacaccaatgcraatcaagacattaccgac 900
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 47742 gatccatgtaccagacaatgcttggatgaggacaccaatgcaaatcaagacattaccgac 47801
Query: 901 atacatcccgacctttcgaccatacttgtcaatgatgaatggtgcragttggaatagtat 960
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 47802 atacatcccgacctttcgaccatacttgtcaatgatgaatggtgcaagttggaatagtat 47861
Query: 961 aagcataccaaacaccatacc 981
|||||||||||||||||||||
Sbjct: 47862 aagcataccaaacaccatacc 47882
>3x_Contig1745
Length = 19830
Score = 1630 bits (821), Expect = 0.0
Identities = 940/981 (95%)
Strand = Plus / Minus
Query: 1 gatcattgccaagactccatttgctagagtcttatcctcaaaattacgcttttggttttc 60
||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||||
Sbjct: 4914 gatcattgccaagacaccatttgctagagacttatcctcgaaattgcgcttttggttttc 4855
Query: 61 tgcagacaatgctgtccacacaacgtaacaagaagtcattgaaactaaggatatcaagaa 120
|||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||
Sbjct: 4854 tgcagacaatgctgtccaaacaacgtagcaagaagtcatggaaactaaagatatcaaaaa 4795
Query: 121 taattgtcttcttttgaagaatggggcgatgtaacctattaaaattagtgaacataacca 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4794 taactgtcttcttttgaagaatggggcgatgtaacctattaaaattagtgaacataacca 4735
Query: 181 gttgtaaagcattaaccaaccattccatttcaattgatcatcaggatcagttataccaat 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4734 gttgtaaagcattagccaaccattccatttcaattgatcatcaggatcagttataccaat 4675
Query: 241 ggagttgaagacttttgataaatagtaagacactaatccatttccggaaagttgtgtgaa 300
||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||
Sbjct: 4674 agagttgaagacttttgatagatagtaagacactaaaccgtttccggaaagttgtgtgaa 4615
Query: 301 aattgcagtccagatcaaaatccacaatctatgacgattaccggaagttttaatgaaatc 360
||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 4614 aattgcagtccagatcaaaatccacaacctatggcgattaccagaagttttaatgaaatc 4555
Query: 361 agagaacttggtagattgggaagctttttcttgttcaatagccaatttaatttctgccag 420
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 4554 agagaacttggtagactgggaggctttttcttgttcaatagccaatttaatttctgctag 4495
Query: 421 ctcaaaatcgatcaaacctgcgtattcctcattatttcctgcgtgatatttattcaagat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4494 ctcaaaatcgatcaaacctgcgtattcctcattatttcctgcgtgatatttatttaagat 4435
Query: 481 tgctcttgcttcagcatctctattatggaacaccaaatatcttggagattctgggcattt 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4434 tgctcttgcttcagcatctctgttatggaacaccaaatatcttggagattctgggcattt 4375
Query: 541 gtatagcgcgacgagctgaacgagtggaaacaaagcttgaatgatagatggaattctcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4374 gtatagcgcgacgagctgaacgagtggaaacaaagcttgaatgatagatggaattctcca 4315
Query: 601 gttccagtggtgagctagatttctgcagccataggtgacccaagctgaaacaatagcgcc 660
|||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 4314 gttccagtggtgggctaggttcctgcagccataggtgacccaagctgaaacaatagcgcc 4255
Query: 661 aaggtaccaacacgtattatatatggaagtacaaagctctctgtgaggcggatatgatat 720
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4254 aaggtaccaacatgtattatatatggaagtacaaagctctctgtgagggggatatgatat 4195
Query: 721 ttctgagatcaaagctggtgtggcaatactgatcaacaatactccagaacctaagataat 780
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4194 ttctgagatcaaagctggtgtggcaatactaatcaacaatactccagaacctaagataat 4135
Query: 781 acgtgaagcaacaaacataccgaagacgtcttttctgtcatagtcctcaggtaaaccatt 840
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 4134 acgtgaagcaacaaacataccgaagacgtcttttttgtcatagtcctctggtaaaccatt 4075
Query: 841 gatccatgtaccagacaatgcttggatgaggacaccaatgcraatcaagacattaccgac 900
||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||
Sbjct: 4074 gatccatgtaccagataatgcttggatgaggacaccaatgcaaatcaaaacattacctac 4015
Query: 901 atacatcccgacctttcgaccatacttgtcaatgatgaatggtgcragttggaatagtat 960
|||||| ||||| || ||||||||||||||||||||| ||||||| |||||||||| |||
Sbjct: 4014 atacattccgactttacgaccatacttgtcaatgatgtatggtgcaagttggaataatat 3955
Query: 961 aagcataccaaacaccatacc 981
|||||||||||||||||||||
Sbjct: 3954 aagcataccaaacaccatacc 3934
>3x_Contig883
Length = 3346
Score = 786 bits (396), Expect = 0.0
Identities = 630/708 (88%)
Strand = Plus / Minus
Query: 1 gatcattgccaagactccatttgctagagtcttatcctcaaaattacgcttttggttttc 60
||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 716 gatcattgccaagacaccatttgctagagatttatcctcgaaattacgtttttggttttc 657
Query: 61 tgcagacaatgctgtccacacaacgtaacaagaagtcattgaaactaaggatatcaagaa 120
||||| || |||||||| |||| ||| ||| | | ||||||| ||||||||||| ||
Sbjct: 656 agcagataaagctgtccagacaatgtagcaacaggccattgaagtcaaggatatcaaaaa 597
Query: 121 taattgtcttcttttgaagaatggggcgatgtaacctattaaaattagtgaacataacca 180
|||||| |||||||||||||||||||||||||||| || ||||||| ||||||||||||
Sbjct: 596 taattgccttcttttgaagaatggggcgatgtaactcatcaaaattaatgaacataacca 537
Query: 181 gttgtaaagcattaaccaaccattccatttcaattgatcatcaggatcagttataccaat 240
||||||||||||||||||||||||||| | ||||| ||||||||||| || ||||||||
Sbjct: 536 gttgtaaagcattaaccaaccattccactctaattgctcatcaggatctgtaataccaat 477
Query: 241 ggagttgaagacttttgataaatagtaagacactaatccatttccggaaagttgtgtgaa 300
|| ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 476 cgaattgaagactttggatagatagtaagacaccaatccatttccggaaagttgtgtgaa 417
Query: 301 aattgcagtccagatcaaaatccacaatctatgacgattaccggaagttttaatgaaatc 360
||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 416 aattgcagtccagatcaaaatccacaatctatggcgattaccggaggttttaaagaaatc 357
Query: 361 agagaacttggtagattgggaagctttttcttgttcaatagccaatttaatttctgccag 420
|||||| ||||||| ||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 356 agagaagttggtagcttgagaagctttttcttgttcaatagccagtttaatttctgccaa 297
Query: 421 ctcaaaatcgatcaaacctgcgtattcctcattatttcctgcgtgatatttattcaagat 480
|||||||||||||| || |||||||||||||||| ||||| || ||||| ||||| ||
Sbjct: 296 ttcaaaatcgatcaagcccgcgtattcctcattatcacctgcatggtatttgttcaaaat 237
Query: 481 tgctcttgcttcagcatctctattatggaacaccaaatatcttggagattctgggcattt 540
|| |||||||| | |||||| |||||||| || | ||||||||||||||||||||| ||
Sbjct: 236 ggcccttgcttcggaatctctgttatggaaaacaagatatcttggagattctgggcagtt 177
Query: 541 gtatagcgcgacgagctgaacgagtggaaacaaagcttgaatgatagatggaattctcca 600
||||||| | | ||| ||||||| || || |||||||||||||||||||||||||||||
Sbjct: 176 gtatagcacaatgagttgaacgatagggaaaaaagcttgaatgatagatggaattctcca 117
Query: 601 gttccagtggtgagctagatttctgcagccataggtgacccaagctgaaacaatagcgcc 660
|||||| || |||||||| ||||||||||| || |||||||||||||| |||| ||| ||
Sbjct: 116 gttccaatgatgagctaggtttctgcagccgtaagtgacccaagctgagacaacagcacc 57
Query: 661 aaggtaccaacacgtattatatatggaagtacaaagctctctgtgagg 708
|||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 56 aaggtaccaacatgtattatatatggaggtacaaagctctctgtgagg 9
>3x_Contig54
Length = 317
Score = 197 bits (99), Expect = 5e-50
Identities = 177/203 (87%), Gaps = 1/203 (0%)
Strand = Plus / Minus
Query: 779 atacgtgaagcaacaaacataccgaagacgtcttttctgtcatagtcctcaggtaaacca 838
|||||||||||||||||||||||||| ||||| || ||||||| ||||| |||||||||
Sbjct: 281 atacgtgaagcaacaaacataccgaacacgtccttcttgtcataatcctctggtaaacca 222
Query: 839 ttgatccatgtaccagacaatgcttggatgaggacaccaatgcraatcaagacattaccg 898
|||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||||
Sbjct: 221 ttgatccatgcaccagatactgcttggatgaggacaccaatgcaaatcaagacattaccc 162
Query: 899 acatacatcccgacctttcgaccatacttgtcaatgatgaatggtgcragttggaatagt 958
|| |||||||||| ||| || |||||||||||||||| ||||||| | ||||||
Sbjct: 161 acgtacatcccga-cttacggccatacttgtcaatgacatatggtgcaaattggaagcac 103
Query: 959 ataagcataccaaacaccatacc 981
| |||||||||||||| ||||||
Sbjct: 102 aaaagcataccaaacatcatacc 80
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7411
Number of Sequences: 1807
Number of extensions: 7411
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 4
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)